Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953211.1_cds_XP_016492450.1_82664
CDS Infomation

[gene=LOC107811968] [db_xref=GeneID:107811968] [protein=actin-related protein 4 isoform X2] [protein_id=XP_016492450.1] [location=join(100279..100404,100489..100562,102479..102559,104027..104087,104289..104338,106529..106583,107521..107598,107707..107760,107937..107990,108065..108125,109081..109132,109662..109728,110520..110582,110707..110769,111220..111282,111417..111481,112012..112080,112228..112273)] [gbkey=CDS]
Sequence

ATGGAAGTTGATTATCCTGATAATCCGGAGGATAATTCTGGATCTGCTCCTGACTCTAAA
TCAAAGGGTAAGCGGAGATTGTATGTTGGATCTCAAGCCTTGGGATTTCGCCGTGATCTC
ATGGAGGTGCTATCGCCCATCAAAGATGGGATGGTTGTGGACTGGGATATTGTAGAGAAC
ATATGGGACCATGCTTTCAGGGAATGCTTACTGATCGATCCGAAGGAGCATCCAATGTTA
CTTGCAGAGCCCTGTTCGAACACTCAGCAGCAGAGGGAAAAGGCTGCAGAGATAATGTTT
GAAAAGTACCAAGTTCCTGCATTGTTTTTGGCCAAAAATGCTGTTCTCACATCTTTTGCA
TCAGGACGTGCGACTTCTTTGGTTGTTGACAGTGGTGGAGGATCGACTACTGTTGCTCCT
GTTCATGATGGATATGTTCTTCAAAAGGCGGTTGCTACATCTCCTATTGGGGGAGAAATT
CTTACCGATTGCTTGATAAAAAGTTTGGAACAGAAAGGCATTACGATAAAACCTCGGTAC
TCATTCAAGCGGAAGGAGATCCGTCCAGGAGAATTTCAGACAGTAGACCTTGACTTCCCT
GATACAACAGAGAGTTACAAACTGTATTGCCAGAGAGCGATTGCAAGTGACATAAAAGAA
TGCGTCTCACGAGCCCCAGATACTCCATATGATGACAGTTCATATTCAAACATTCCAACG
ACGTCTTATGAGCTACCTGACGGGCAAACGATAGAAGTCGGAGCGGATAGATTCAAGATT
CCTGATATTATTTTCAATCCATCATTAGTTCAGACTATCCCCGGTATGGAAAGTTTTGCT
GAGACTGCTGCTTCTCTTCGTGGTCTACCACAAATGGTTATCGAGAGCATTAACAAGTGC
GATGTGGATATCCGAAGAGAACTTTTTAGTAGTATATTGCTTGCTGGGGGAACAGCATCG
ATGCAGCAACTCAAAGAACGGCTGGAAAAGGACTTGCTAGAGGAGTCTCCCCAAGCAGCG
AGAGTCAAAGTGCTGGCTAGTGGAAATGCTACAGAAAGGAGATTCAGTGTTTGGATAGGG
GGCAGCATATTGGCATCTCTTGGTTCCTTTCAACAAATGTGGTTTTCGAAGTCTGAGTAC
GAAGAGCACGGGGCATCTTACGTTCAAAGAAAATGTCCTTAA

Peptide Sequence

PEP ID

XP_016492450.1
PEP Infomation

PREDICTED: actin-related protein 4 isoform X2 [Nicotiana tabacum]
Sequence

MEVDYPDNPEDNSGSAPDSKSKGKRRLYVGSQALGFRRDLMEVLSPIKDGMVVDWDIVEN
IWDHAFRECLLIDPKEHPMLLAEPCSNTQQQREKAAEIMFEKYQVPALFLAKNAVLTSFA
SGRATSLVVDSGGGSTTVAPVHDGYVLQKAVATSPIGGEILTDCLIKSLEQKGITIKPRY
SFKRKEIRPGEFQTVDLDFPDTTESYKLYCQRAIASDIKECVSRAPDTPYDDSSYSNIPT
TSYELPDGQTIEVGADRFKIPDIIFNPSLVQTIPGMESFAETAASLRGLPQMVIESINKC
DVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIG
GSILASLGSFQQMWFSKSEYEEHGASYVQRKCP

Transcript Sequence

Gene sequence data has not been registered.